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Recent Undigested food in stools help?

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For about 2 years I've been having undigested food in my stools (the worst foods

are usually seeds then grains which I usually avoid) this was never an issue

before I got the swine flu vaccine.

I am working with a Doctor but nothing has worked so far including, 3 months

MMS, hydrochloric acid, probiotics, hpylori/parasite/fungus treatments, enzymes,

bile, fasting, homeopathic vaccine detox, liver flushing and not to mention

healthy diet.

I've done 1 food intolerance panel from biohealth diagnostics which tested for

eggs, soy, dairy, gluten and gluten came out mildly positive but I was gluten

free and still am today.

Also my amino acid levels were the lowest ever seen despite ingesting tons of

grassfed organic beef and taking an amino acid supplement well before the test.

So anyone have any ideas on where to look, what to try taking and what tests to

run etc?

(also diagnosed with lyme, bartonella, PANDAS which I have had for way longer

than when this problem started).

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